The detailed information of tRNA gene sequence


Sequence ID>WENV170675484
Genome IDLCWZ01090315
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 108
End posion on genome 183
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aataaaatat
tRNA gene sequence 
GCCCAGATAGCTCAGTCGGTAGAGCAGTGGACTGAAAATCCTCGTGTCGGTGGTTCGATT
CCGCCTCTGGGCACCA
Downstream region at tRNA end position 
aaagaataga
Secondary structure (Cloverleaf model)
>WENV170675484	Phe	GAA
                   t      ACCA aaagaataga
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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