The detailed information of tRNA gene sequence


Sequence ID>WENV170675487
Genome IDLCWZ01091387
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 121
End posion on genome 45
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cttccggtcc
tRNA gene sequence 
GGGCCTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGATAGTTCGAG
TCTATCCAGGCCCACCA
Downstream region at tRNA end position 
tcagttatca
Secondary structure (Cloverleaf model)
>WENV170675487	Ile	GAT
                   c      ACCA tcagttatca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T A T C     A
      G G A        A      | | | | |     G
    T       C T C G       G A T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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