The detailed information of tRNA gene sequence


Sequence ID>WENV170675529
Genome IDLCWZ01111899
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 124
End posion on genome 49
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccggtgcttc
tRNA gene sequence 
GCCCAGGTAGCTCAGTTGGTAGAGCATGCGACTGAAAATCGCAGTGTCGGCGGTTCGATT
CCGTCCCTGGGCACCA
Downstream region at tRNA end position 
tttacctccg
Secondary structure (Cloverleaf model)
>WENV170675529	Phe	GAA
                   c      ACCA tttacctccg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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