The detailed information of tRNA gene sequence


Sequence ID>WENV170675959
Genome IDLDZQ01001474
Search identical group
Phylum/Class[LDZQ] terrestrial metagenome; oil reservoir sample I2
Species
Start position on genome 11478
End posion on genome 11571
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttgacggt
tRNA gene sequence 
GGAAGCGTATCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGCCGAAAGGT
CGTCGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
ttttctttta
Secondary structure (Cloverleaf model)
>WENV170675959	SeC(p)	TCA
                   t      GCCA ttttctttta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGCCGAAAGGTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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