The detailed information of tRNA gene sequence


Sequence ID>WENV170676073
Genome IDLDZR01000730
Search identical group
Phylum/Class[LDZR] terrestrial metagenome; oil reservoir sample K2
Species
Start position on genome 6746
End posion on genome 6657
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataaaattcc
tRNA gene sequence 
GGAGGCGTGTCCGAATTGGCTAAGGAGCCGGTCTTGAAAATCGGTGGGGGTGAAGCCCCC
GTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
ccttttctat
Secondary structure (Cloverleaf model)
>WENV170676073	Ser	TGA
                   c      GCCA ccttttctat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGGGGTGAAGCCCCCGT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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