The detailed information of tRNA gene sequence


Sequence ID>WENV170676217
Genome IDLDZR01001754
Search identical group
Phylum/Class[LDZR] terrestrial metagenome; oil reservoir sample K2
Species
Start position on genome 158
End posion on genome 257
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggttaaggac
tRNA gene sequence 
GGGGGTGGATCGGGCCTGGTGGCCTGCCTGGACTTCAAATCCAGCCGGCGCGCGGGGTCG
TCCCGGGCGCGGTGGGTTCGATTCCCACACACTCCCGCCA
Downstream region at tRNA end position 
aaatttattt
Secondary structure (Cloverleaf model)
>WENV170676217	SeC(p)	TCA
                   c      GCCA aaatttattt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G G G C       G T G G G     C
    G       | | + |                 T T
    T       C C T G
      G G          C     CCGGCGCGCGGGGTCGTCCCGGGCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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