The detailed information of tRNA gene sequence


Sequence ID>WENV170676448
Genome IDLDZR01002691
Search identical group
Phylum/Class[LDZR] terrestrial metagenome; oil reservoir sample K2
Species
Start position on genome 40174
End posion on genome 40085
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatatgaaat
tRNA gene sequence 
GGAGGCGTGTCCGAATTGGCTAAGGAGCCGGTCTTGAAAATCGGTGGGGGTGAAGCCCCC
TTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
gctttcaata
Secondary structure (Cloverleaf model)
>WENV170676448	Ser	TGA
                   t      GCCA gctttcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGGGGTGAAGCCCCCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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