The detailed information of tRNA gene sequence


Sequence ID>WENV170676519
Genome IDLDZS01000567
Search identical group
Phylum/Class[LDZS] terrestrial metagenome; oil reservoir sample K3
Species
Start position on genome 1578
End posion on genome 1671
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aagtgtacgc
tRNA gene sequence 
GGGAGTGGATGGGTCCTGGTGGGCCTCCTGGTCTTCAAAACCAGTTGACGGGTCAGGTGC
CCGTGGTGGGTTCGATTCCCACACACTCCCGCCA
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>WENV170676519	SeC(p)	TCA
                   c      GCCA tttattttta
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | +                 T T
    T       G C C T
      G G          C     TTGACGGGTCAGGTGCCCGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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