The detailed information of tRNA gene sequence


Sequence ID>WENV170676652
Genome IDLDZS01001781
Search identical group
Phylum/Class[LDZS] terrestrial metagenome; oil reservoir sample K3
Species
Start position on genome 29297
End posion on genome 29393
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caggacgcgc
tRNA gene sequence 
GGAGAGATGGCCGAGTCTGGCTGAAGGCGGTCGCCTGCTAAGCGACTAAGCGAGTGTAAA
GCTTGCTTCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattattat
Secondary structure (Cloverleaf model)
>WENV170676652	Ser	GCT
                   c      GCCA ttattattat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        G     TAAGCGAGTGTAAAGCTTGCTTC
                    G - C
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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