The detailed information of tRNA gene sequence


Sequence ID>WENV170676655
Genome IDLDZS01001781
Search identical group
Phylum/Class[LDZS] terrestrial metagenome; oil reservoir sample K3
Species
Start position on genome 30216
End posion on genome 30311
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcaaccagc
tRNA gene sequence 
GGAGAGATGGCTGAGTTGGTCGAAGGCGCTCGCCTGGAAAGCGAGTAGGCGGGGCTAAAC
CCTGCCTCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattgtctt
Secondary structure (Cloverleaf model)
>WENV170676655	Ser	GGA
                   c      GCCA ttattgtctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G G G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TAGGCGGGGCTAAACCCTGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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