The detailed information of tRNA gene sequence


Sequence ID>WENV170676824
Genome IDLDZS01002365
Search identical group
Phylum/Class[LDZS] terrestrial metagenome; oil reservoir sample K3
Species
Start position on genome 23311
End posion on genome 23405
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagtccgtaa
tRNA gene sequence 
GGAGGGATGCTCGAGGGGTCGAAGAGGGCGGCTTGCTAAGCCGTAGCCGGGCTGTTGAGG
CTCGGCCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
caaaggagtt
Secondary structure (Cloverleaf model)
>WENV170676824	Ser	GCT
                   a      GCCA caaaggagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      G G A        G      | | | | |     G
    G       G C T C       G T G G G     C
    G         | | |                 T T
    T       A G A G
      C G A        G     AGCCGGGCTGTTGAGGCTCGGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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