The detailed information of tRNA gene sequence


Sequence ID>WENV170677152
Genome IDLDZT01003260
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 3499
End posion on genome 3595
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tggataaagc
tRNA gene sequence 
GGAGGCGCATGGTGACTGGTGTTGCCCGCGGGCTTCAAACCCGTCGAGGGTCTGTAAGGC
AGGCCTTGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
gtttttttgt
Secondary structure (Cloverleaf model)
>WENV170677152	SeC	TCA
                   c      GCCA gtttttttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C A        T      | | | | |     G
    G       G T G G       G T G G G     C
    G       + + | |                 T T
    T       T G C C
      G T          C     CGAGGGTCTGTAAGGCAGGCCTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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