The detailed information of tRNA gene sequence


Sequence ID>WENV170677220
Genome IDLDZT01003869
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 2762
End posion on genome 2674
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgcgaggac
tRNA gene sequence 
GGAGGCGTATCCTAATTGGCTAAGGAGCCGGTCTCGAAAATCGGTGGGGTTGACGCCCCT
TGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
gtgggcggtt
Secondary structure (Cloverleaf model)
>WENV170677220	Ser	CGA
                   c      GCCA gtgggcggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        A      | | | | |     G
    T       T C C T       G T G G G     C
    G       | | | |                 T T
    G       A G G A
      C T A        G     TGGGGTTGACGCCCCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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