The detailed information of tRNA gene sequence


Sequence ID>WENV170677229
Genome IDLDZT01003979
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 1450
End posion on genome 1373
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctgtgcct
tRNA gene sequence 
GGGCTCGTAGCTCAGTTTGGTTAGAGCTTCCGGCTCATAACCGGGCGGTCGGTGGTTCGA
CTCCACCCGAGCCCACCA
Downstream region at tRNA end position 
gacatggcgg
Secondary structure (Cloverleaf model)
>WENV170677229	Met	CAT
                   t      ACCA gacatggcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     C C A C C     A
    T T G A        A      | | | | |     G
  T         C T C G       G G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          T     CGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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