The detailed information of tRNA gene sequence


Sequence ID>WENV170677271
Genome IDLDZT01004621
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 4075
End posion on genome 4000
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaattatta
tRNA gene sequence 
AGGTCCGTAGCTCCAACGGCAGAGCACTGGACTCCAAATCCAGGGGTTGCAGGTTCAAAT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
tttttttgtt
Secondary structure (Cloverleaf model)
>WENV170677271	Trp	CCA
                   a      GCCA tttttttgtt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A A C        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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