The detailed information of tRNA gene sequence


Sequence ID>WENV170677379
Genome IDLDZT01005191
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 331
End posion on genome 239
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcacccaccc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCGGTCTCGAAAACCGTTAGGCGGGTTTCCCCC
GTCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtagcagcat
Secondary structure (Cloverleaf model)
>WENV170677379	Ser	CGA
                   c      GCCA gtagcagcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAGGCGGGTTTCCCCCGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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