The detailed information of tRNA gene sequence


Sequence ID>WENV170677484
Genome IDLDZT01005690
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 782
End posion on genome 689
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aacaaagagc
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTGGGGGCCAAAAGC
CCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttatgaattt
Secondary structure (Cloverleaf model)
>WENV170677484	Ser	CGA
                   c      GCCA ttatgaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGGGGGCCAAAAGCCCTCAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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