The detailed information of tRNA gene sequence


Sequence ID>WENV170677555
Genome IDLDZT01006792
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 12
End posion on genome 101
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaggcacag
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTACGGGTAACCGTA
CCACGAGTTCGAATCTCGTCGCTTCCGCCA
Downstream region at tRNA end position 
ttatcttgcg
Secondary structure (Cloverleaf model)
>WENV170677555	Ser	GCT
                   g      GCCA ttatcttgcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G T G G       A C G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTAACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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