The detailed information of tRNA gene sequence


Sequence ID>WENV170677729
Genome IDLDZT01008466
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 12858
End posion on genome 12947
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caatactgcc
tRNA gene sequence 
GGAGAGATGGCAGAGCCTGGTTGAATGCACTGAACTCGAAATTCAGCGTGCCCTTGCGGG
CACCGGGGGTTCGAATCCCTCTCTCTCCGCtt
Downstream region at tRNA end position 
tgtcattcaa
Secondary structure (Cloverleaf model)
>WENV170677729	Ser	CGA
                   c      GCtt tgtcattcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        A     CGTGCCCTTGCGGGCACC
                    C - G
                    T - A
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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