The detailed information of tRNA gene sequence


Sequence ID>WENV170677827
Genome IDLDZT01009446
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 967
End posion on genome 870
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtgtttttac
tRNA gene sequence 
GGGGGTGGATGGTGCCTGGTGGTGCTCCTGGTCTTCAAAACCAGTCGTCGGGCAGCGATC
CTGTCCGTGGTGGGTTCGATTCCCACACACTCCCGCCA
Downstream region at tRNA end position 
gcagatgcca
Secondary structure (Cloverleaf model)
>WENV170677827	SeC(p)	TCA
                   c      GCCA gcagatgcca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G T G G       G T G G G     C
    G       + + | +                 T T
    T       T G C T
      G G          C     TCGTCGGGCAGCGATCCTGTCCGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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