The detailed information of tRNA gene sequence


Sequence ID>WENV170678031
Genome IDLDZT01010562
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 2263
End posion on genome 2178
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccagactgag
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGTAAGGCGGTGGTCTCGAAAACCACTGGCGTTCCGCCTCGG
GAGTTCGAATCTCCCCCTCGGCGCCA
Downstream region at tRNA end position 
tcctgcctcc
Secondary structure (Cloverleaf model)
>WENV170678031	Ser	CGA
                   g      GCCA tcctgcctcc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGCGTTCCGCCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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