The detailed information of tRNA gene sequence


Sequence ID>WENV170678189
Genome IDLDZT01011858
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 116
End posion on genome 28
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcaggcatt
tRNA gene sequence 
GGAGAGATAGCATAGTCCGGCCTAATGCGCGCGCCTGGAGAGCGCGTGTACCCTTTGGGT
ACCGTGGGTTCGAATCCCACTCTCTCCGCtg
Downstream region at tRNA end position 
gaattttaaa
Secondary structure (Cloverleaf model)
>WENV170678189	Ser	GGA
                   t      GCtg gaattttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     G
  C         T A C G       G T G G G     C
  G         | | | |                 T T
  G         A T G C
    C C T A        G     TGTACCCTTTGGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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