The detailed information of tRNA gene sequence


Sequence ID>WENV170678235
Genome IDLDZT01012628
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 8605
End posion on genome 8511
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagttaagaa
tRNA gene sequence 
GGAGAGGTGGCTGAGCCCGGCTGAAAGCGCTCGACTCGAAATCGAGTAGGCGGGTAGTCC
CTGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
agtttcagtt
Secondary structure (Cloverleaf model)
>WENV170678235	Ser	CGA
                   a      GCCA agtttcagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  C         G T C G       G C G G G     C
  G           | | |                 T T
  G         A A G C
    C T G A        G     TAGGCGGGTAGTCCCTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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