The detailed information of tRNA gene sequence


Sequence ID>WENV170678263
Genome IDLDZT01012748
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 30494
End posion on genome 30403
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagcacgaac
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGACGAACGGGGCGGTCTCGAAAACCGCTGTGGTCACTTTTGAT
CACCGAGGGTTCGAATCCCTCCCTCTCCGCCT
Downstream region at tRNA end position 
tttgaatcca
Secondary structure (Cloverleaf model)
>WENV170678263	Ser	CGA
                   c      GCCT tttgaatcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    A       A C G G
      C G A        G     TGTGGTCACTTTTGATCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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