The detailed information of tRNA gene sequence


Sequence ID>WENV170678273
Genome IDLDZT01012820
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 3964
End posion on genome 4051
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttattgta
tRNA gene sequence 
GGAGAGGTAGCGTAGTCTGGCCTAACGCGCGCGCCTGGAGAGCGCGTGTACCGCAAGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
ttattttaat
Secondary structure (Cloverleaf model)
>WENV170678273	Ser	GGA
                   a      GCtc ttattttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     G
  T         T G C G       G T G G G     C
  G         | | | |                 T T
  G         A C G C
    C C T A        G     TGTACCGCAAGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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