The detailed information of tRNA gene sequence


Sequence ID>WENV170678298
Genome IDLDZT01013345
Search identical group
Phylum/Class[LDZT] terrestrial metagenome; oil reservoir sample SB1
Species
Start position on genome 18697
End posion on genome 18602
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgctttaagc
tRNA gene sequence 
GGGAATGGTAGGGTCCCGGTGGGTTCCCCGGTCTTCAAAACCGGTGACGGGCTGTTAGGC
AGGCCGTGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
ttataagaaa
Secondary structure (Cloverleaf model)
>WENV170678298	SeC(p)	TCA
                   c      GCCt ttataagaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        A      + | | | |     G
    G       T G G G       G T G G G     C
    G       + + + |                 T T
    T       G T T C
      G G          C     TGACGGGCTGTTAGGCAGGCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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