The detailed information of tRNA gene sequence


Sequence ID>WENV170678399
Genome IDLDZU01000082
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 9011
End posion on genome 9105
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccttataacc
tRNA gene sequence 
GGGAATGGTAGGGTCCCGGTGGGTCCCCCGGTCTTCAAAACCGGTGACGGGCTGTCAGGC
AGGCCGTGGTGGGTTCGACTCCCATCCATTCCCGCtt
Downstream region at tRNA end position 
cattaagaaa
Secondary structure (Cloverleaf model)
>WENV170678399	SeC(p)	TCA
                   c      GCtt cattaagaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        A      + | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGACGGGCTGTCAGGCAGGCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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