The detailed information of tRNA gene sequence


Sequence ID>WENV170678491
Genome IDLDZU01000959
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 2882
End posion on genome 2789
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaatgtcacc
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGAAGGAGCACGATTGGAAATCGTGTGTACGTGCTAAAACG
CGTACCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttgattga
Secondary structure (Cloverleaf model)
>WENV170678491	Ser	GGA
                   c      GCCA ttttgattga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTACGTGCTAAAACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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