The detailed information of tRNA gene sequence


Sequence ID>WENV170678632
Genome IDLDZU01003454
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 3451
End posion on genome 3376
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttcgcgcgc
tRNA gene sequence 
AGGTCCGTGGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGCAGGTTCAAGT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
ttatgttcaa
Secondary structure (Cloverleaf model)
>WENV170678632	Trp	CCA
                   c      GCCA ttatgttcaa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        G      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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