The detailed information of tRNA gene sequence


Sequence ID>WENV170678707
Genome IDLDZU01003962
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 9568
End posion on genome 9653
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttaaggcag
tRNA gene sequence 
GCCGGGATAGTCTAGTCCGGTAAGGCGGCGGCCTTGAAAGCCGCTGGTGCCCTGCACCTC
GGGAGTTCAAATCTCCCTCCCGGCGCtg
Downstream region at tRNA end position 
atttnnnnnn
Secondary structure (Cloverleaf model)
>WENV170678707	Ser	TGA
                   g      GCtg atttnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCCTGCACCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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