The detailed information of tRNA gene sequence


Sequence ID>WENV170678773
Genome IDLDZU01004492
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 20208
End posion on genome 20131
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctgtgcct
tRNA gene sequence 
GGGCTCGTAGCTCAGTTTGGTTAGAGCTTCCGGCTCATAACCGGGCGGTCGGTGGTTCGA
CTCCACCCGAGCCCACCA
Downstream region at tRNA end position 
gacatggcgg
Secondary structure (Cloverleaf model)
>WENV170678773	Met	CAT
                   t      ACCA gacatggcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     C C A C C     A
    T T G A        A      | | | | |     G
  T         C T C G       G G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          T     CGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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