The detailed information of tRNA gene sequence


Sequence ID>WENV170678914
Genome IDLDZU01006064
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 80517
End posion on genome 80427
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgtaaaaaa
tRNA gene sequence 
GGAGAGGTGGTCGAGTTGGTTTAAGGCACCGCACTCGAAATGCGGAGTATCCGAAAGGGT
ACCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
ttttacaatt
Secondary structure (Cloverleaf model)
>WENV170678914	Ser	CGA
                   a      GCCA ttttacaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       C C G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     AGTATCCGAAAGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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