The detailed information of tRNA gene sequence


Sequence ID>WENV170679104
Genome IDLDZU01007794
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 1568
End posion on genome 1478
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgtcataaa
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGTGGTCTTTTTGATC
ACCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
aaaaagccgt
Secondary structure (Cloverleaf model)
>WENV170679104	Ser	CGA
                   a      GCAA aaaaagccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGGTCTTTTTGATCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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