The detailed information of tRNA gene sequence


Sequence ID>WENV170679138
Genome IDLDZU01008577
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 1180
End posion on genome 1274
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tactttaatc
tRNA gene sequence 
GGAGAGATGACCGAGTGGCCGAAGGTGGTTGCCTGCTAAGCAATTGAGCGGATTTTAAGT
CTGCTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV170679138	Ser	GCT
                   c      GCCA ttttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGAGCGGATTTTAAGTCTGCTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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