The detailed information of tRNA gene sequence


Sequence ID>WENV170679377
Genome IDLDZU01010370
Search identical group
Phylum/Class[LDZU] terrestrial metagenome; oil reservoir sample SB2
Species
Start position on genome 802
End posion on genome 707
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgctttaagc
tRNA gene sequence 
GGGAATGGTAGGGTCCCGGTGGGTTCCCCGGTCTTCAAAACCGGTGACGGGCTGTTAGGC
AGGCCGTGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
ttataagaaa
Secondary structure (Cloverleaf model)
>WENV170679377	SeC(p)	TCA
                   c      GCCt ttataagaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        A      + | | | |     G
    G       T G G G       G T G G G     C
    G       + + + |                 T T
    T       G T T C
      G G          C     TGACGGGCTGTTAGGCAGGCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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