The detailed information of tRNA gene sequence


Sequence ID>WENV170681138
Genome IDLFFM01000108
Search identical group
Phylum/Class[LFFM] soda lake metagenome; sample Tc-Br; brine of Tanatar trona crystallizer
Species
Start position on genome 38585
End posion on genome 38670
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
cagacacggT
tRNA gene sequence
GTCGTGGTAGCCAAGCGGCCCAAGGCGCATGGTTGCTAACCATGTGGCGTCAAGCCTCCG
GGGTTCGAATCCCCGCCACGACGTCg
Downstream region at tRNA end position
gcacgggatc
Secondary structure (Cloverleaf model)
>WENV170681138	Ser	GCT
                   T      GTCg gcacgggatc
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     G
    G       A C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TGGCGTCAAGCCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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