The detailed information of tRNA gene sequence


Sequence ID>PHG0300094
Genome IDDQ535032
Search identical group
Phylum/ClassPodoviridae
SpeciesLactococcus virus KSY1 CRC266 (DQ535032)
Start position on genome 70260
End posion on genome 70332
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggtctttaa
tRNA gene sequence 
GGTTCTTTAGCTCAATAGGCAGAGCATGCAGCCCATAACTGCAAAGGCGTAGGTTCAATT
CCTACAGGAACCAtaa
Downstream region at tRNA end position 
ggagattata
Secondary structure (Cloverleaf model)
>PHG0300094	Met	CAT
                   a      Ataa ggagattata
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     T + G
                     T - A          T T
                    T     C A T C C     A
      T A A        A      | | | | |     A
    A       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AAGGC
                    T - A
                    G - C
                    C - G
                    A - T
                    G - C
                  C       A
                  C       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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