The detailed information of tRNA gene sequence


Sequence ID>WENV170682179
Genome IDLFFM01006940
Search identical group
Phylum/Class[LFFM] soda lake metagenome; sample Tc-Br; brine of Tanatar trona crystallizer
Species
Start position on genome 4813
End posion on genome 4728
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaccgcgt
tRNA gene sequence 
GTTGCGGTAGCCAAGCCTGGCCCAAGGCGCTGGGTTGCTAACTCAGTGGCGTAATGCCCC
CGGGGTTCGAATCCCCGCCGCAACGCtc
Downstream region at tRNA end position 
gctcatcata
Secondary structure (Cloverleaf model)
>WENV170682179	Ser	GCT
                   t      GCtc gctcatcata
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     G
  T         A C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C C C A        G     TGGCGTAATGCCCC
                    C - G
                    T - A
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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