The detailed information of tRNA gene sequence


Sequence ID>WENV170683741
Genome IDLFRM01002230
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 597
End posion on genome 522
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgttcagcaa
tRNA gene sequence 
GCCCATGTAGCTCAGTAGGCAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCGGTTCAATC
CCGGTCATGGGCTCCA
Downstream region at tRNA end position 
ttattatatt
Secondary structure (Cloverleaf model)
>WENV170683741	Thr	GGT
                   a      TCCA ttattatatt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     A
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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