The detailed information of tRNA gene sequence


Sequence ID>WENV170683748
Genome IDLFRM01002559
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 963
End posion on genome 890
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagggcttat
tRNA gene sequence 
ACGGGTCTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGC
CTCTCGACCCGTGCac
Downstream region at tRNA end position 
atacgatctg
Secondary structure (Cloverleaf model)
>WENV170683748	Trp	CCA
                   t      GCac atacgatctg
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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