The detailed information of tRNA gene sequence


Sequence ID>WENV170683762
Genome IDLFRM01002858
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7970
End posion on genome 7893
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acggacagtt
tRNA gene sequence 
CGGGATGTAGCTCAGTTTGGCTAGAGCGCACGGTTCGGGACCGTGAGGTCGCTGGTTCAA
ATCCAGTCATCCCGACCA
Downstream region at tRNA end position 
aatcacccaa
Secondary structure (Cloverleaf model)
>WENV170683762	Pro	CGG
                   t      ACCA aatcacccaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
    T T G A        A      + | | | |     A
  T         C T C G       G C T G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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