The detailed information of tRNA gene sequence


Sequence ID>WENV170683825
Genome IDLFRM01007176
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 176
End posion on genome 94
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
agagaataaa
tRNA gene sequence 
GCGGGTGTGGCGGAATTGGCAGACGCACCAGATTTAGGATCTGGCGCCTTCGGGCATGGG
GGTTCAAGTCCCTTCACCCGCACtt
Downstream region at tRNA end position 
gctttctata
Secondary structure (Cloverleaf model)
>WENV170683825	Leu	TAG
                   a      ACtt gctttctata
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGCCTTCGGGCAT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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