The detailed information of tRNA gene sequence


Sequence ID>WENV170683830
Genome IDLFRM01007312
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11243
End posion on genome 11319
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgatgtttat
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCCAGAGCATGCGGTTCATACCCGCAGTGTCGGTGGTTCGAC
TCCACTCGCCGCTACCA
Downstream region at tRNA end position 
aattgtaatg
Secondary structure (Cloverleaf model)
>WENV170683830	Met	CAT
                   t      ACCA aattgtaatg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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