The detailed information of tRNA gene sequence


Sequence ID>WENV170683893
Genome IDLFRM01009575
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 374
End posion on genome 449
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtaaaatgct
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCACCTGCTTTGCACGCAGGGGGTCAGGAGTTCGAAT
CTCCTTATCTCCACCA
Downstream region at tRNA end position 
ggaaacgggc
Secondary structure (Cloverleaf model)
>WENV170683893	Ala	TGC
                   t      ACCA ggaaacgggc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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