The detailed information of tRNA gene sequence


Sequence ID>WENV170683934
Genome IDLFRM01010694
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4026
End posion on genome 3952
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcaccattcc
tRNA gene sequence 
GGCCCCTTGGTCAAGTGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGAGTTCGAATC
TCCTAGGGGTCACCA
Downstream region at tRNA end position 
tttttttagg
Secondary structure (Cloverleaf model)
>WENV170683934	Glu	TTC
                   c      ACCA tttttttagg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C T C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G A G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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