The detailed information of tRNA gene sequence


Sequence ID>WENV170683952
Genome IDLFRM01011832
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 105
End posion on genome 179
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttaattatgt
tRNA gene sequence 
GCGGAAGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGAGTTCGAATC
TCGTCTTCCGCTCCA
Downstream region at tRNA end position 
taatggaaaa
Secondary structure (Cloverleaf model)
>WENV170683952	Gly	GCC
                   t      TCCA taatggaaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C T C     A
        G A        G      + | | | |     G
      T     C T C G       G C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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