The detailed information of tRNA gene sequence


Sequence ID>WENV170683998
Genome IDLFRM01014138
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1409
End posion on genome 1486
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atgaaaaatc
tRNA gene sequence 
GGGCGTTTAGCTCAGCTGGTTCAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGA
ATCCGTCAACGCCCACCA
Downstream region at tRNA end position 
ccttcacaaa
Secondary structure (Cloverleaf model)
>WENV170683998	Val	TAC
                   c      ACCA ccttcacaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T A
                    T     C T G C C     A
    T C G A        A      | + | | |     G
  G         C T C G       G G C G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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