The detailed information of tRNA gene sequence


Sequence ID>WENV170684023
Genome IDLFRM01015448
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 28332
End posion on genome 28257
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
caccaaattt
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGCTGGTTCGATT
CCGGCTCTGGGCACCA
Downstream region at tRNA end position 
caacataata
Secondary structure (Cloverleaf model)
>WENV170684023	Phe	GAA
                   t      ACCA caacataata
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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