The detailed information of tRNA gene sequence


Sequence ID>WENV170684024
Genome IDLFRM01015448
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 28240
End posion on genome 28156
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aataatatat
tRNA gene sequence 
GGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCACCGCCTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170684024	Tyr	GTA
                   t      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      T G A        T      | | | | |     G
    G       G C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGGCACCGCCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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