The detailed information of tRNA gene sequence


Sequence ID>WENV170684027
Genome IDLFRM01015508
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9913
End posion on genome 9984
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaccataagc
tRNA gene sequence 
GTCAGGATGGCAGAGTGGTTATGCTTCCGGCTGCAACCCGGAATTATGTGAGTTCGATTC
TCACTTCTGACTttt
Downstream region at tRNA end position 
caaaaggctg
Secondary structure (Cloverleaf model)
>WENV170684027	Cys	GCA
                   c      Tttt caaaaggctg
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G + T
                     A - T          T T
                    T     C A C T C     A
        G A        G      | | | | |     G
      T     G A C G       G T G A G     C
      G       | | |                 T T
      G     A T G C
        T T        T     ATTAT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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